C A R P
Contacts of Aromatic Residues in Proteins

Big descripion of the method
Template pdb:
or input PDB code:

Table of distances

Distance
Distance between centres of aromatic rings
 

Table of α-angles

α-angles
α-angles on the picture
 
β-angles
β-angles on the picture

Table of β-angles

 
Shift
"d"-distance on the picture

Table of shifts

 

All data table

HELP
Distance - Distance between centres of aromatic rings
Aplpha - α-angles on the picture
Betta - β-angles on the picture
Shift - "d"-distance on the picture
First Second Distance Alpha Betta Shift
111
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Statistics for 06 dec 2020

ALL residues parallel 30° 60° perpendicular 120° 150° ALL
His-His parallel 30° 60° perpendicular 120° 150° ALL
His-Phe parallel 30° 60° perpendicular 120° 150° ALL
His-Tyr parallel 30° 60° perpendicular 120° 150° ALL
His-Trp parallel 30° 60° perpendicular 120° 150° ALL
Phe-Phe parallel 30° 60° perpendicular 120° 150° ALL
Phe-Tyr parallel 30° 60° perpendicular 120° 150° ALL
Phe-Trp parallel 30° 60° perpendicular 120° 150° ALL
Tyr-Tyr parallel 30° 60° perpendicular 120° 150° ALL
Tyr-Trp parallel 30° 60° perpendicular 120° 150° ALL
Trp-Trp parallel 30° 60° perpendicular 120° 150° ALL

Statistics for 22 feb 2018

ALL ALL perpendicular ALL parallel
Phe-Phe all Phe-Phe perpendicular Phe-Phe parallel
Phe-Trp all Phe-Trp perpendicular Phe-Trp parallel
Phe-Tyr all Phe-Tyr perpendicular Phe-Tyr parallel
His-Phe all His-Phe perpendicular His-Phe parallel
His-His all His-His perpendicular His-His parallel
His-Trp all His-Trp perpendicular His-Trp parallel
His-Tyr all His-Tyr norma His-Tyr parallel
Trp-Trp all Trp-Trp perpendicular Trp-Trp parallel
Tyr-Trp all Tyr-Trp perpendicular Tyr-Trp parallel
Tyr-Tyr all Tyr-Tyr perpendicular Tyr-Tyr parallel

HELP

  1. Find your PDB-structure on the HOME tab using the PDB-code or upload your own structure. Press GET button.
    • For example: see 2zwh
  2. See results on Results tab:
    • Look interactive 3D-visualization. View protein using different imaging modes using the buttons to the right of the imaging window.
    • See distances between aromatic rings on Distances tab
    • See α-corners between aromatic rings on α-corners tab
    • See β-corners between aromatic rings on β-corners tab
    • See shifts between aromatic rings on Shifts tab
    • See all calculated data on All data tab
  3. Click on all hyperlinks in data tables for selecting residues in visulazation windows.



Galzitskaya O.V.
Team Leader
ogalzit@vega.protres.ru
Lobanov M.Yu.
Programming, mathematics
m.u.lobanov@mail.ru
Likhachev I.V.
Programming
ilya_lihachev@mail.ru